Introduction to Plant Phenotyping Technologies

Learn about technologies used in plant phenotyping and their effect on data collection and analysis of plant traits with this online course from the University of Nottingham and University of Lincoln.

Duration

4 weeks

Weekly study

1 hour

100% online

How it works

Unlimited subscription

Learn more

Established

1996

Location

Lincoln, Lincolnshire, UK

Explore the technologies used in modern plant phenotyping

Modern technologies have revolutionised plant phenotyping processes, allowing the recording of plant trait characterisation to take place over hours, rather than weeks or months.

On this four-week course, you’ll delve into some of the various technologies used in plant phenotyping, learning about data generation in different environments – both the advantages and challenges

Discover different types of phenotyping kit

Plant phenotyping data can be gathered using a variety of equipment including satellites, phenotyping platforms, and hand-held devices.

You’ll be introduced to some of these devices, look at some of the data they produce, and discuss the challenges of using phenotyping technologies in practice, both inside and out. With this knowledge, you’ll be able to consider the practicalities of each type of technology in various situations.

Investigate phenotyping data collection techniques

You’ll explore the types of data and measurements required in different contexts. You’ll discuss the impact of big data on plant phenotyping and how technologies can aid meaningful analysis.

Using this understanding, you’ll be able to think about what data should be gathered depending on the crop characteristics you want to analyse and discuss which technologies would be best suited to the task.

Examine methods used to phenotype plants in different environments

To gather meaningful data, varied methods of plant phenotyping must be used in field and controlled environments.

You’ll investigate plant phenotyping concepts and technologies in different environments, assessing the suitability and ease of data collection.

By the end of this course, you’ll have been introduced to some phenotyping equipment, concepts and data, and thought about how to use this data to inform crop production.

  • Week 1

    Introduction

    • Welcome and Introductions

      Welcome to the course.

    • Introduction to plant phenotyping

      In this activity, we discuss what plant phenotyping is, provide historical background, and talk about different types of plant phenotyping data.

    • Summary of week 1

      What have we learned so far?

  • Week 2

    Lab and controlled environment phenotyping

    • Welcome to week 2

      Welcome back to week 2 of the course.

    • Introduction to phenotyping under controlled conditions

      In this activity, we introduce you to phenotyping under controlled conditions, define what controlled environments are, and talk about their advantages and disadvantages.

    • Summary of week 2

      This week we've looked at some example phenotyping approaches in lab and controlled environments. We've seen the hardware to capture data and how you might analyse some of this data in software.

  • Week 3

    Field phenotyping

    • Welcome to week 3

      Welcome back to week 3 of the course.

    • Importance of field phenotyping

      Importance of field phenotyping

    • Field phenotyping platforms and equipment

      Field phenotyping platforms and equipment

    • Overview of data generated and traits of interest

      Overview of data generated and traits of interest

    • Overcoming barriers for successful data collection

      Overcoming barriers for successful data collection

    • Summary of week 3

      This week we've looked at what field phenotyping is and discussed some platforms and equipment that can be used to collect phenotyping data in the field.

  • Week 4

    Technologies for all environments

    • Welcome to week 4

      Welcome back to week 4 of the course.

    • High throughput phenotyping using chlorophyll fluorescence

      High throughput phenotyping using chlorophyll fluorescence

    • Phenotyping of photosynthesis using gas exchange

      Phenotyping of photosynthesis using gas exchange

    • Practical exercises

      These exercises will focus on chlorophyll fluorescence and phenotyping photosynthesis, the two previously discussed topics.

    • Anatomics – Laser ablation tomography and image analysis

      Anatomics – Laser ablation tomography and image analysis

    • Summary and conclusion

      What have we learned in this course?

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